PathMaster
Content-based Cell Image Retrieval Using Automated Feature Extraction
- Correspondence and reprints: Mark Mattie, MD, PhD, Department of Pathology, Yale University School of Medicine, P.O. Box 208070, New Haven, CT 06520; e-mail: 〈mark.mattie{at}yale.edu〉
- Received 10 June 1999
- Accepted 21 December 1999
Abstract
Objective Currently, when cytopathology images are archived, they are typically stored with a limited text-based description of their content. Such a description inherently fails to quantify the properties of an image and refers to an extremely small fraction of its information content. This paper describes a method for automatically indexing images of individual cells and their associated diagnoses by computationally derived cell descriptors. This methodology may serve to better index data contained in digital image databases, thereby enabling cytologists and pathologists to cross-reference cells of unknown etiology or nature.
Design The indexing method, implemented in a program called PathMaster, uses a series of computer-based feature extraction routines. Descriptors of individual cell characteristics generated by these routines are employed as indexes of cell morphology, texture, color, and spatial orientation.
Measurements The indexing fidelity of the program was tested after populating its database with images of 152 lymphocytes/lymphoma cells captured from lymph node touch preparations stained with hematoxylin and eosin. Images of “unknown” lymphoid cells, previously unprocessed, were then submitted for feature extraction and diagnostic cross-referencing analysis.
Results PathMaster listed the correct diagnosis as its first differential in 94 percent of recognition trials. In the remaining 6 percent of trials, PathMaster listed the correct diagnosis within the first three “differentials.”
Conclusion PathMaster is a pilot cell image indexing program/search engine that creates an indexed reference of images. Use of such a reference may provide assistance in the diagnostic/prognostic process by furnishing a prioritized list of possible identifications for a cell of uncertain etiology.
Footnotes
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This work was supported in part by NIH grants T15-LM07756 and G08-LM05583 from the National Library of Medicine.








